PAKISTAN
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Genomic Characterization of Plasmid-Mediated tet(X4), mcr-1, and blaNDM-5 Genes in Escherichia coli from Farmed Minks Highlights Their Role as a One Health Reservoir
 
Asim Munir1#, Muhammad Shoaib1#, Yuetong Lv1, Ruilong Song1, Edward J Feil2, Zhiqiang Wang1,3,4,5* and Ruichao Li1,3,4,5*

1Jiangsu Co-innovation Center for Prevention and Control of Important Animal Infectious Diseases and Zoonoses, College of Veterinary Medicine, Yangzhou University, Yangzhou, P. R. China; 2The Milner Centre for Evolution, University of Bath, Claverton Down, Bath BA2 7AY, UK; 3Jiangsu Interdisciplinary Center for Zoonoses and Biosafety, Yangzhou University, Yangzhou, 225009, PR China; 4Institute of Comparative Medicine, Yangzhou University, Yangzhou, P. R. China; 5Jiangsu Key Laboratory of Zoonosis, Yangzhou University, Yangzhou, 225009, PR China.

*Corresponding author: rchl88@yeah.net (RL); zqwang@yzu.edu.cn (ZW)

Abstract   

The emergence and dissemination of plasmid-mediated resistance to tigecycline, colistin, and carbapenems in Escherichia coli pose a serious public health threat. This study intended to reveal the genomic characteristics of E. coli isolates resistant to these last-resort antibiotics recovered from minks. A total of 100 samples were collected from 25 farmed minks obtained post-slaughter from a single commercial fur farm, with four tissue types sampled per animal including liver, lungs, spleen, and intestine. Following phenotypical characterization all resistant isolates were characterized by Illumina short-read whole-genome sequencing and six representative isolates were further subjected to CycloneSEQ long-read sequencing to reveal complete genomic profile. Conjugation and fitness cost assays were employed to evaluate the transfer rate and biological burden of resistance genes. Collectively, 25 E. coli isolates were recovered that harbor one or more plasmid-mediated antimicrobial resistance genes mcr-1, tet(X4), or blaNDM-5, imparting resistance to colistin, tigecycline, and carbapenems, respectively. Among these, mcr-1-positive isolates accounted for 52% (n=13), while tet(X4), and blaNDM-5 were each detected in 24% (n=6) isolates. The resistant E. coli strains exhibited diverse sequence types, predominantly ST746, ST219, and ST641.The tet(X4) gene was located on ~190kb hybrid IncFIA (HI1)/HI1B(R27)/HI1A plasmid, whereas mcr-1 and blaNDM-5 were associated with IncI2, IncX4, IncHI2, and IncX3, IncB/O/K/Z plasmid types respectively. Moreover, the virulence profile revealed that all E. coli isolates belong to ExPEC (UPEC) pathotype. At present, this study represents the first identification of tet(X4)-positive E. coli and carbapenem-resistant blaNDM-5-positive E. coli coexisting with colistin resistant mcr-1 gene from minks in China. This study emphasizes the need of continued surveillance to observe the pervasiveness and dissemination of emerging ARGs in minks.

To Cite This Article: Munir A, Shoaib M, Lv Y, Song R, Feil EJ, Wang Z and Li R, 2026. Genomic characterization of plasmid-mediated tet(x4), mcr-1, and blandm-5 genes in Escherichia coli from farmed minks highlights their role as a one health reservoir. Pak Vet J, 46(6): 1525-1535. http://dx.doi.org/10.29261/pakvetj/2026.144

 
 
   
 

ISSN 0253-8318 (Print)
ISSN 2074-7764 (Online)



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